| Registro completo |
| Provedor de dados: |
ArchiMer
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| País: |
France
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| Título: |
The Kinome of Pacific Oyster Crassostrea gigas, Its Expression during Development and in Response to Environmental Factors
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| Autores: |
Epelboin, Yanouk
Quintric, Laure
Guevelou, Eric
Boudry, Pierre
Pichereau, Vianney
Corporeau, Charlotte
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| Data: |
2016-05
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| Ano: |
2016
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| Resumo: |
Oysters play an important role in estuarine and coastal marine habitats, where the majority of humans live. In these ecosystems, environmental degradation is substantial, and oysters must cope with highly dynamic and stressful environmental constraints during their lives in the intertidal zone. The availability of the genome sequence of the Pacific oyster Crassostrea gigas represents a unique opportunity for a comprehensive assessment of the signal transduction pathways that the species has developed to deal with this unique habitat. We performed an in silico analysis to identify, annotate and classify protein kinases in C. gigas, according to their kinase domain taxonomy classification, and compared with kinome already described in other animal species. The C. gigas kinome consists of 371 protein kinases, making it closely related to the sea urchin kinome, which has 353 protein kinases. The absence of gene redundancy in some groups of the C. gigas kinome may simplify functional studies of protein kinases. Through data mining of transcriptomes in C. gigas, we identified part of the kinome which may be central during development and may play a role in response to various environmental factors. Overall, this work contributes to a better understanding of key sensing pathways that may be central for adaptation to a highly dynamic marine environment.
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| Tipo: |
Text
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| Idioma: |
Inglês
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| Identificador: |
https://archimer.ifremer.fr/doc/00340/45069/44494.pdf
https://archimer.ifremer.fr/doc/00340/45069/44495.csv
https://archimer.ifremer.fr/doc/00340/45069/44496.pdf
DOI:10.1371/journal.pone.0155435
https://archimer.ifremer.fr/doc/00340/45069/
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| Editor: |
Public Library Science
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| Formato: |
application/pdf
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| Fonte: |
Plos One (1932-6203) (Public Library Science), 2016-05 , Vol. 11 , N. 5 , P. -
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| Direitos: |
2016 Epelboin et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
info:eu-repo/semantics/openAccess
restricted use
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